Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Mir433-201ENSMUST00000093564 124 ntBASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Gm14058-201ENSMUST00000116082 735 ntBASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Gm15236-201ENSMUST00000117309 379 ntBASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Gm8731-201ENSMUST00000118088 412 ntBASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim9Q8C7M3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Gm15595-201ENSMUST00000120840 961 ntBASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Gm6108-201ENSMUST00000208365 367 ntBASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms