Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Gm26047-201ENSMUST00000157308 113 ntBASIC11.14□□□□□ -0.63
Vrk1Q80X41 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Gm9136-201ENSMUST00000193368 454 ntBASIC11.14□□□□□ -0.63
Vrk1Q80X41 Gm37981-201ENSMUST00000194280 535 ntBASIC11.14□□□□□ -0.63
Vrk1Q80X41 Gm26047-202ENSMUST00000198840 115 ntBASIC11.14□□□□□ -0.63
Vrk1Q80X41 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Gm19009-201ENSMUST00000223072 823 ntBASIC11.14□□□□□ -0.63
Vrk1Q80X41 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Gm12419-201ENSMUST00000116649 636 ntBASIC11.13□□□□□ -0.63
Vrk1Q80X41 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Gm24398-201ENSMUST00000157870 109 ntBASIC11.13□□□□□ -0.63
Vrk1Q80X41 Gm8574-201ENSMUST00000203207 924 ntBASIC11.13□□□□□ -0.63
Vrk1Q80X41 Gm8342-201ENSMUST00000209839 757 ntBASIC11.13□□□□□ -0.63
Vrk1Q80X41 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.13□□□□□ -0.63
Vrk1Q80X41 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.13□□□□□ -0.63
Vrk1Q80X41 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Vrk1Q80X41 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Vrk1Q80X41 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vrk1Q80X41 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vrk1Q80X41 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vrk1Q80X41 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vrk1Q80X41 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.12□□□□□ -0.63
Vrk1Q80X41 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Vrk1Q80X41 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Vrk1Q80X41 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vrk1Q80X41 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vrk1Q80X41 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Vrk1Q80X41 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vrk1Q80X41 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Vrk1Q80X41 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Vrk1Q80X41 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms