Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Gm5805-201ENSMUST00000072779 456 ntBASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gm23272-201ENSMUST00000104053 129 ntBASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gm12990-201ENSMUST00000120372 468 ntBASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gm15610-201ENSMUST00000120584 195 ntBASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gm7150-201ENSMUST00000122032 981 ntBASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gm5706-201ENSMUST00000181525 993 ntBASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gm8342-201ENSMUST00000209839 757 ntBASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox11Q7M6Y2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Olfr584-201ENSMUST00000098210 964 ntBASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox11Q7M6Y2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms