Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Six4Q61321 Mir6546-201ENSMUST00000184460 62 ntBASIC11.71□□□□□ -0.53
Six4Q61321 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.71□□□□□ -0.53
Six4Q61321 Gm7504-201ENSMUST00000201449 424 ntBASIC11.71□□□□□ -0.53
Six4Q61321 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Six4Q61321 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Six4Q61321 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six4Q61321 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.71□□□□□ -0.53
Six4Q61321 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.71□□□□□ -0.53
Six4Q61321 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Six4Q61321 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.71□□□□□ -0.54
Six4Q61321 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six4Q61321 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six4Q61321 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Six4Q61321 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six4Q61321 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six4Q61321 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Six4Q61321 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Six4Q61321 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six4Q61321 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six4Q61321 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six4Q61321 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.71□□□□□ -0.54
Six4Q61321 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six4Q61321 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Six4Q61321 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six4Q61321 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Six4Q61321 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Six4Q61321 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Six4Q61321 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.7□□□□□ -0.54
Six4Q61321 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Six4Q61321 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Gm7666-201ENSMUST00000146631 819 ntBASIC11.7□□□□□ -0.54
Six4Q61321 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.7□□□□□ -0.54
Six4Q61321 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.7□□□□□ -0.54
Six4Q61321 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.7□□□□□ -0.54
Six4Q61321 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.7□□□□□ -0.54
Six4Q61321 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.7□□□□□ -0.54
Six4Q61321 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.7□□□□□ -0.54
Six4Q61321 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.7□□□□□ -0.54
Six4Q61321 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.7□□□□□ -0.54
Six4Q61321 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Six4Q61321 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.7□□□□□ -0.54
Six4Q61321 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.7□□□□□ -0.54
Six4Q61321 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.7□□□□□ -0.54
Six4Q61321 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Six4Q61321 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.7□□□□□ -0.54
Six4Q61321 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six4Q61321 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Six4Q61321 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Six4Q61321 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.69□□□□□ -0.54
Six4Q61321 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Six4Q61321 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Gm11956-201ENSMUST00000119525 512 ntBASIC11.69□□□□□ -0.54
Six4Q61321 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Gm44100-201ENSMUST00000204329 436 ntBASIC11.69□□□□□ -0.54
Six4Q61321 Gm44506-201ENSMUST00000206278 965 ntBASIC11.69□□□□□ -0.54
Six4Q61321 Gm17825-201ENSMUST00000206836 794 ntBASIC11.69□□□□□ -0.54
Six4Q61321 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.69□□□□□ -0.54
Six4Q61321 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.69□□□□□ -0.54
Six4Q61321 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Six4Q61321 Gm8420-201ENSMUST00000097103 598 ntBASIC11.69□□□□□ -0.54
Six4Q61321 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Six4Q61321 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms