Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.18□□□□□ -0.62
ClpbQ60649 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.18□□□□□ -0.62
ClpbQ60649 Gm3332-201ENSMUST00000189337 928 ntBASIC11.18□□□□□ -0.62
ClpbQ60649 Gm37986-201ENSMUST00000193285 383 ntBASIC11.18□□□□□ -0.62
ClpbQ60649 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.18□□□□□ -0.62
ClpbQ60649 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
ClpbQ60649 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Gm5705-201ENSMUST00000066241 711 ntBASIC11.18□□□□□ -0.62
ClpbQ60649 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.18□□□□□ -0.62
ClpbQ60649 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.17□□□□□ -0.62
ClpbQ60649 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.17□□□□□ -0.62
ClpbQ60649 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
ClpbQ60649 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.17□□□□□ -0.62
ClpbQ60649 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.17□□□□□ -0.62
ClpbQ60649 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.17□□□□□ -0.62
ClpbQ60649 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.17□□□□□ -0.62
ClpbQ60649 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.17□□□□□ -0.62
ClpbQ60649 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.17□□□□□ -0.62
ClpbQ60649 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.17□□□□□ -0.62
ClpbQ60649 Gm14058-201ENSMUST00000116082 735 ntBASIC11.17□□□□□ -0.62
ClpbQ60649 Gm13035-201ENSMUST00000117496 342 ntBASIC11.17□□□□□ -0.62
ClpbQ60649 Gm12857-201ENSMUST00000117678 592 ntBASIC11.17□□□□□ -0.62
ClpbQ60649 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.17□□□□□ -0.62
ClpbQ60649 Gm23085-201ENSMUST00000157849 293 ntBASIC11.17□□□□□ -0.62
ClpbQ60649 Gm22902-201ENSMUST00000158488 302 ntBASIC11.17□□□□□ -0.62
ClpbQ60649 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.17□□□□□ -0.62
ClpbQ60649 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.17□□□□□ -0.62
ClpbQ60649 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.17□□□□□ -0.62
ClpbQ60649 Gm42997-202ENSMUST00000200321 985 ntBASIC11.17□□□□□ -0.62
ClpbQ60649 Gm3786-201ENSMUST00000202659 378 ntBASIC11.17□□□□□ -0.62
ClpbQ60649 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.17□□□□□ -0.62
ClpbQ60649 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.17□□□□□ -0.62
ClpbQ60649 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.17□□□□□ -0.62
ClpbQ60649 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.17□□□□□ -0.62
ClpbQ60649 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
ClpbQ60649 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
ClpbQ60649 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
ClpbQ60649 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClpbQ60649 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.17□□□□□ -0.62
ClpbQ60649 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.16□□□□□ -0.62
ClpbQ60649 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
ClpbQ60649 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
ClpbQ60649 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
ClpbQ60649 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms