Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm8752-201ENSMUST00000173427 1694 ntBASIC8.72□□□□□ -1.01
Trav3-3Q5R1C3 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav3-3Q5R1C3 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trav3-3Q5R1C3 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 AC140462.2-201ENSMUST00000225718 2433 ntBASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Trav3-3Q5R1C3 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm12859-201ENSMUST00000117834 427 ntBASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm13612-201ENSMUST00000119276 390 ntBASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm23363-201ENSMUST00000175024 79 ntBASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm27437-201ENSMUST00000183429 107 ntBASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm18916-201ENSMUST00000198264 1246 ntBASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm38671-201ENSMUST00000200573 130 ntBASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 AC125206.2-201ENSMUST00000217454 574 ntBASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm6992-201ENSMUST00000217973 1607 ntBASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 AC154849.3-201ENSMUST00000223733 1660 ntBASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm18798-201ENSMUST00000187264 1700 ntBASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm37582-201ENSMUST00000192953 1409 ntBASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav3-3Q5R1C3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Bcl2-202ENSMUST00000189999 2841 ntBASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms