Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Gm18056-201ENSMUST00000207670 568 ntBASIC11.48□□□□□ -0.57
Scn2bQ56A07 Gm18061-201ENSMUST00000208350 562 ntBASIC11.48□□□□□ -0.57
Scn2bQ56A07 Gm18063-201ENSMUST00000208529 568 ntBASIC11.48□□□□□ -0.57
Scn2bQ56A07 Gm18052-201ENSMUST00000208750 559 ntBASIC11.48□□□□□ -0.57
Scn2bQ56A07 Gm18212-201ENSMUST00000211678 889 ntBASIC11.48□□□□□ -0.57
Scn2bQ56A07 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.48□□□□□ -0.57
Scn2bQ56A07 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn2bQ56A07 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.47□□□□□ -0.57
Scn2bQ56A07 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Gm26286-201ENSMUST00000104166 134 ntBASIC11.47□□□□□ -0.57
Scn2bQ56A07 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Gm2383-201ENSMUST00000181461 807 ntBASIC11.47□□□□□ -0.57
Scn2bQ56A07 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.47□□□□□ -0.57
Scn2bQ56A07 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Gm19287-201ENSMUST00000203190 358 ntBASIC11.47□□□□□ -0.57
Scn2bQ56A07 Gm44262-201ENSMUST00000204969 372 ntBASIC11.47□□□□□ -0.57
Scn2bQ56A07 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Scn2bQ56A07 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn2bQ56A07 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scn2bQ56A07 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Scn2bQ56A07 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scn2bQ56A07 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Scn2bQ56A07 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Scn2bQ56A07 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scn2bQ56A07 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn2bQ56A07 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn2bQ56A07 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.46□□□□□ -0.57
Scn2bQ56A07 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn2bQ56A07 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms