Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Gm25766-201ENSMUST00000104101 131 ntBASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Gm15374-201ENSMUST00000119313 844 ntBASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Gm13937-201ENSMUST00000121000 988 ntBASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Matn2-203ENSMUST00000226766 3252 ntBASIC12.56□□□□□ -0.4
Snx27Q3UHD6 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Snx27Q3UHD6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Gm14395-201ENSMUST00000120494 563 ntBASIC12.55□□□□□ -0.4
Snx27Q3UHD6 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Gm25492-201ENSMUST00000157383 129 ntBASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Gm6722-201ENSMUST00000221586 390 ntBASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx27Q3UHD6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms