Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Gm38317-201ENSMUST00000195564 343 ntBASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Rps4l-202ENSMUST00000204242 789 ntBASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Gm13097-201ENSMUST00000210722 397 ntBASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Gm17827-201ENSMUST00000211825 742 ntBASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms