Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.17□□□□□ -0.62
Hoxc4Q08624 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Gm8531-201ENSMUST00000188319 893 ntBASIC11.17□□□□□ -0.62
Hoxc4Q08624 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Gm6722-201ENSMUST00000221586 390 ntBASIC11.17□□□□□ -0.62
Hoxc4Q08624 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.17□□□□□ -0.62
Hoxc4Q08624 Lect2-202ENSMUST00000225183 823 ntBASIC11.17□□□□□ -0.62
Hoxc4Q08624 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Gm10263-201ENSMUST00000085163 300 ntBASIC11.17□□□□□ -0.62
Hoxc4Q08624 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxc4Q08624 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.16□□□□□ -0.62
Hoxc4Q08624 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm25148-201ENSMUST00000104611 123 ntBASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm12795-201ENSMUST00000117594 539 ntBASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm23694-201ENSMUST00000179335 110 ntBASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm29067-201ENSMUST00000190821 470 ntBASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm45594-201ENSMUST00000211717 241 ntBASIC11.16□□□□□ -0.62
Hoxc4Q08624 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.16□□□□□ -0.62
Hoxc4Q08624 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.16□□□□□ -0.62
Hoxc4Q08624 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.16□□□□□ -0.62
Hoxc4Q08624 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxc4Q08624 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxc4Q08624 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.15□□□□□ -0.62
Hoxc4Q08624 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxc4Q08624 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Hoxc4Q08624 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxc4Q08624 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.15□□□□□ -0.62
Hoxc4Q08624 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms