Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cntn3Q07409 Gm15352-201ENSMUST00000118696 270 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Gm28937-201ENSMUST00000185413 695 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 Gm29400-201ENSMUST00000187208 695 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 Gm28662-201ENSMUST00000188446 695 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 Gm28251-201ENSMUST00000188835 695 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 Gm9136-201ENSMUST00000193368 454 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 Gm37318-201ENSMUST00000194325 695 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 Gm38017-201ENSMUST00000194768 695 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 Gm37287-201ENSMUST00000195449 695 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 Gm37793-201ENSMUST00000195548 695 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 Gm9132-201ENSMUST00000210182 832 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Gm7940-201ENSMUST00000218195 769 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.22□□□□□ -0.45
Cntn3Q07409 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.22□□□□□ -0.45
Cntn3Q07409 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Cntn3Q07409 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cntn3Q07409 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cntn3Q07409 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cntn3Q07409 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn3Q07409 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.21□□□□□ -0.45
Cntn3Q07409 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.21□□□□□ -0.45
Cntn3Q07409 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.21□□□□□ -0.45
Cntn3Q07409 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cntn3Q07409 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.21□□□□□ -0.45
Cntn3Q07409 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.21□□□□□ -0.45
Cntn3Q07409 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Cntn3Q07409 Gm11783-201ENSMUST00000119549 885 ntBASIC12.21□□□□□ -0.45
Cntn3Q07409 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.21□□□□□ -0.45
Cntn3Q07409 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cntn3Q07409 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Cntn3Q07409 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.21□□□□□ -0.45
Cntn3Q07409 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.21□□□□□ -0.45
Cntn3Q07409 Gm45113-201ENSMUST00000207518 165 ntBASIC12.21□□□□□ -0.45
Cntn3Q07409 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.21□□□□□ -0.45
Cntn3Q07409 Gm45398-201ENSMUST00000210561 165 ntBASIC12.21□□□□□ -0.45
Cntn3Q07409 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.21□□□□□ -0.45
Cntn3Q07409 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.21□□□□□ -0.45
Cntn3Q07409 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.21□□□□□ -0.45
Cntn3Q07409 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cntn3Q07409 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn3Q07409 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cntn3Q07409 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn3Q07409 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.21□□□□□ -0.46
Cntn3Q07409 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn3Q07409 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn3Q07409 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn3Q07409 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn3Q07409 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cntn3Q07409 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn3Q07409 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cntn3Q07409 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn3Q07409 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn3Q07409 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.21□□□□□ -0.46
Cntn3Q07409 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn3Q07409 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn3Q07409 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn3Q07409 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cntn3Q07409 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cntn3Q07409 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Cntn3Q07409 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cntn3Q07409 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms