Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Mir6953-201ENSMUST00000184745 68 ntBASIC10.77□□□□□ -0.68
Cacna1aP97445 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cacna1aP97445 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Cacna1aP97445 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.68
Cacna1aP97445 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.77□□□□□ -0.68
Cacna1aP97445 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cacna1aP97445 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cacna1aP97445 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cacna1aP97445 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cacna1aP97445 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Cacna1aP97445 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Cacna1aP97445 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Gm8197-202ENSMUST00000193422 934 ntBASIC10.77□□□□□ -0.69
Cacna1aP97445 Gm37197-201ENSMUST00000195607 401 ntBASIC10.77□□□□□ -0.69
Cacna1aP97445 AC187103.3-201ENSMUST00000225725 646 ntBASIC10.77□□□□□ -0.69
Cacna1aP97445 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Cacna1aP97445 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC10.77□□□□□ -0.69
Cacna1aP97445 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cacna1aP97445 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.77□□□□□ -0.69
Cacna1aP97445 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cacna1aP97445 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cacna1aP97445 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Cacna1aP97445 Gm13117-201ENSMUST00000120894 691 ntBASIC10.76□□□□□ -0.69
Cacna1aP97445 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.76□□□□□ -0.69
Cacna1aP97445 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC10.76□□□□□ -0.69
Cacna1aP97445 Gm5335-201ENSMUST00000182995 1000 ntBASIC10.76□□□□□ -0.69
Cacna1aP97445 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.76□□□□□ -0.69
Cacna1aP97445 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.76□□□□□ -0.69
Cacna1aP97445 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.76□□□□□ -0.69
Cacna1aP97445 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.76□□□□□ -0.69
Cacna1aP97445 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cacna1aP97445 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Mir1905-201ENSMUST00000122779 82 ntBASIC10.76□□□□□ -0.69
Cacna1aP97445 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.76□□□□□ -0.69
Cacna1aP97445 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC10.76□□□□□ -0.69
Cacna1aP97445 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.76□□□□□ -0.69
Cacna1aP97445 Gm18552-201ENSMUST00000187425 538 ntBASIC10.76□□□□□ -0.69
Cacna1aP97445 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC10.76□□□□□ -0.69
Cacna1aP97445 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cacna1aP97445 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cacna1aP97445 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.76□□□□□ -0.69
Cacna1aP97445 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cacna1aP97445 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.75□□□□□ -0.69
Cacna1aP97445 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cacna1aP97445 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.75□□□□□ -0.69
Cacna1aP97445 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cacna1aP97445 Gm14807-201ENSMUST00000116640 983 ntBASIC10.75□□□□□ -0.69
Cacna1aP97445 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cacna1aP97445 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cacna1aP97445 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms