Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim43bP86448 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim43bP86448 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim43bP86448 Gm24845-201ENSMUST00000158034 109 ntBASIC11.99□□□□□ -0.49
Trim43bP86448 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Gm5070-201ENSMUST00000177599 862 ntBASIC11.99□□□□□ -0.49
Trim43bP86448 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim43bP86448 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim43bP86448 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.99□□□□□ -0.49
Trim43bP86448 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim43bP86448 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim43bP86448 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim43bP86448 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim43bP86448 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43bP86448 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.98□□□□□ -0.49
Trim43bP86448 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.98□□□□□ -0.49
Trim43bP86448 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.98□□□□□ -0.49
Trim43bP86448 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.98□□□□□ -0.49
Trim43bP86448 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.98□□□□□ -0.49
Trim43bP86448 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim43bP86448 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Gm45598-202ENSMUST00000210719 986 ntBASIC11.98□□□□□ -0.49
Trim43bP86448 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.98□□□□□ -0.49
Trim43bP86448 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim43bP86448 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim43bP86448 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.98□□□□□ -0.49
Trim43bP86448 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.98□□□□□ -0.49
Trim43bP86448 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43bP86448 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim43bP86448 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms