Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Gm24934-201ENSMUST00000103764 111 ntBASIC9.75□□□□□ -0.85
SgcaP82350 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.75□□□□□ -0.85
SgcaP82350 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.75□□□□□ -0.85
SgcaP82350 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Gm7029-201ENSMUST00000173226 450 ntBASIC9.75□□□□□ -0.85
SgcaP82350 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
SgcaP82350 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SgcaP82350 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.75□□□□□ -0.85
SgcaP82350 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Gm9908-201ENSMUST00000211534 448 ntBASIC9.75□□□□□ -0.85
SgcaP82350 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SgcaP82350 Gm10012-201ENSMUST00000078252 192 ntBASIC9.75□□□□□ -0.85
SgcaP82350 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.75□□□□□ -0.85
SgcaP82350 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SgcaP82350 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Gm45132-201ENSMUST00000207234 2542 ntBASIC9.75□□□□□ -0.85
SgcaP82350 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Gm37648-201ENSMUST00000192072 2563 ntBASIC9.74□□□□□ -0.85
SgcaP82350 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SgcaP82350 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SgcaP82350 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.74□□□□□ -0.85
SgcaP82350 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.74□□□□□ -0.85
SgcaP82350 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SgcaP82350 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.74□□□□□ -0.85
SgcaP82350 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.74□□□□□ -0.85
SgcaP82350 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.74□□□□□ -0.85
SgcaP82350 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.74□□□□□ -0.85
SgcaP82350 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Gm13342-201ENSMUST00000121055 207 ntBASIC9.74□□□□□ -0.85
SgcaP82350 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC9.74□□□□□ -0.85
SgcaP82350 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.74□□□□□ -0.85
SgcaP82350 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SgcaP82350 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SgcaP82350 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Gm27023-201ENSMUST00000182372 285 ntBASIC9.74□□□□□ -0.85
SgcaP82350 Gm42693-201ENSMUST00000196779 631 ntBASIC9.74□□□□□ -0.85
SgcaP82350 Gm45384-201ENSMUST00000210451 277 ntBASIC9.74□□□□□ -0.85
SgcaP82350 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Gm17794-201ENSMUST00000220252 955 ntBASIC9.74□□□□□ -0.85
SgcaP82350 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SgcaP82350 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.74□□□□□ -0.85
SgcaP82350 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
SgcaP82350 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SgcaP82350 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SgcaP82350 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.74□□□□□ -0.85
SgcaP82350 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
SgcaP82350 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SgcaP82350 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcaP82350 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms