Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 AC159819.2-201ENSMUST00000216151 342 ntBASIC12□□□□□ -0.49
Smad1P70340 AC125486.1-201ENSMUST00000218701 320 ntBASIC12□□□□□ -0.49
Smad1P70340 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12□□□□□ -0.49
Smad1P70340 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12□□□□□ -0.49
Smad1P70340 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Smad1P70340 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Smad1P70340 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smad1P70340 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smad1P70340 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Smad1P70340 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smad1P70340 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smad1P70340 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.99□□□□□ -0.49
Smad1P70340 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Smad1P70340 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Smad1P70340 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smad1P70340 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.99□□□□□ -0.49
Smad1P70340 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.99□□□□□ -0.49
Smad1P70340 Gm44126-201ENSMUST00000204831 514 ntBASIC11.99□□□□□ -0.49
Smad1P70340 Gm45598-202ENSMUST00000210719 986 ntBASIC11.99□□□□□ -0.49
Smad1P70340 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.99□□□□□ -0.49
Smad1P70340 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.99□□□□□ -0.49
Smad1P70340 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.99□□□□□ -0.49
Smad1P70340 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smad1P70340 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Smad1P70340 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Smad1P70340 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.99□□□□□ -0.49
Smad1P70340 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smad1P70340 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Smad1P70340 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Smad1P70340 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.98□□□□□ -0.49
Smad1P70340 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smad1P70340 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Smad1P70340 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Smad1P70340 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.98□□□□□ -0.49
Smad1P70340 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Smad1P70340 Gm19459-201ENSMUST00000176240 835 ntBASIC11.98□□□□□ -0.49
Smad1P70340 Gm5706-201ENSMUST00000181525 993 ntBASIC11.98□□□□□ -0.49
Smad1P70340 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.98□□□□□ -0.49
Smad1P70340 Gm29615-201ENSMUST00000185371 697 ntBASIC11.98□□□□□ -0.49
Smad1P70340 Gm28224-201ENSMUST00000186078 697 ntBASIC11.98□□□□□ -0.49
Smad1P70340 Gm29001-201ENSMUST00000186177 697 ntBASIC11.98□□□□□ -0.49
Smad1P70340 Gm28292-201ENSMUST00000186593 697 ntBASIC11.98□□□□□ -0.49
Smad1P70340 Gm28101-201ENSMUST00000187608 697 ntBASIC11.98□□□□□ -0.49
Smad1P70340 Gm29076-201ENSMUST00000187689 697 ntBASIC11.98□□□□□ -0.49
Smad1P70340 Gm28302-201ENSMUST00000187931 697 ntBASIC11.98□□□□□ -0.49
Smad1P70340 Gm28646-201ENSMUST00000188220 697 ntBASIC11.98□□□□□ -0.49
Smad1P70340 Gm28205-201ENSMUST00000189177 697 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms