Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.91□□□□□ -0.5
Ybx1P62960 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ybx1P62960 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ybx1P62960 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.91□□□□□ -0.5
Ybx1P62960 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Ybx1P62960 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ybx1P62960 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.91□□□□□ -0.5
Ybx1P62960 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.9□□□□□ -0.5
Ybx1P62960 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.9□□□□□ -0.5
Ybx1P62960 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.9□□□□□ -0.5
Ybx1P62960 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.9□□□□□ -0.5
Ybx1P62960 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ybx1P62960 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ybx1P62960 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ybx1P62960 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ybx1P62960 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.9□□□□□ -0.5
Ybx1P62960 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Gm35713-201ENSMUST00000210516 199 ntBASIC11.9□□□□□ -0.5
Ybx1P62960 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.9□□□□□ -0.5
Ybx1P62960 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.9□□□□□ -0.5
Ybx1P62960 Gm30671-201ENSMUST00000214898 318 ntBASIC11.9□□□□□ -0.5
Ybx1P62960 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.9□□□□□ -0.5
Ybx1P62960 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.9□□□□□ -0.5
Ybx1P62960 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ybx1P62960 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Gm16380-201ENSMUST00000077997 478 ntBASIC11.9□□□□□ -0.5
Ybx1P62960 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Ybx1P62960 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.9□□□□□ -0.5
Ybx1P62960 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ybx1P62960 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.9□□□□□ -0.51
Ybx1P62960 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ybx1P62960 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Ybx1P62960 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ybx1P62960 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ybx1P62960 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Ybx1P62960 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Ybx1P62960 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.89□□□□□ -0.51
Ybx1P62960 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ybx1P62960 Gm12036-201ENSMUST00000120008 530 ntBASIC11.89□□□□□ -0.51
Ybx1P62960 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.89□□□□□ -0.51
Ybx1P62960 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.89□□□□□ -0.51
Ybx1P62960 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Gm6114-201ENSMUST00000182472 968 ntBASIC11.89□□□□□ -0.51
Ybx1P62960 Gm4978-201ENSMUST00000071565 801 ntBASIC11.89□□□□□ -0.51
Ybx1P62960 Gm5805-201ENSMUST00000072779 456 ntBASIC11.89□□□□□ -0.51
Ybx1P62960 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ybx1P62960 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Ybx1P62960 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Ybx1P62960 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.89□□□□□ -0.51
Ybx1P62960 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ybx1P62960 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms