Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubgcp3P58854 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.88□□□□□ -0.51
Tubgcp3P58854 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubgcp3P58854 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubgcp3P58854 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Gm12380-201ENSMUST00000119012 544 ntBASIC11.87□□□□□ -0.51
Tubgcp3P58854 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Gm28686-201ENSMUST00000187404 609 ntBASIC11.87□□□□□ -0.51
Tubgcp3P58854 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.87□□□□□ -0.51
Tubgcp3P58854 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.87□□□□□ -0.51
Tubgcp3P58854 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubgcp3P58854 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.86□□□□□ -0.51
Tubgcp3P58854 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.86□□□□□ -0.51
Tubgcp3P58854 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Erich3-203ENSMUST00000189969 3460 ntBASIC11.86□□□□□ -0.51
Tubgcp3P58854 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.86□□□□□ -0.51
Tubgcp3P58854 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tubgcp3P58854 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubgcp3P58854 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Tubgcp3P58854 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubgcp3P58854 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubgcp3P58854 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubgcp3P58854 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubgcp3P58854 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubgcp3P58854 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubgcp3P58854 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubgcp3P58854 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms