Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.95□□□□□ -0.34
Tpm1P58771 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Tpm1P58771 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Tpm1P58771 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tpm1P58771 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.94□□□□□ -0.34
Tpm1P58771 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Tpm1P58771 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Tpm1P58771 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Gm5419-201ENSMUST00000119301 527 ntBASIC12.94□□□□□ -0.34
Tpm1P58771 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Gm13316-201ENSMUST00000140537 691 ntBASIC12.94□□□□□ -0.34
Tpm1P58771 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tpm1P58771 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tpm1P58771 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tpm1P58771 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Tpm1P58771 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.94□□□□□ -0.34
Tpm1P58771 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.94□□□□□ -0.34
Tpm1P58771 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tpm1P58771 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.93□□□□□ -0.34
Tpm1P58771 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.93□□□□□ -0.34
Tpm1P58771 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Tpm1P58771 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.93□□□□□ -0.34
Tpm1P58771 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Tpm1P58771 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.93□□□□□ -0.34
Tpm1P58771 Gm14832-201ENSMUST00000121289 322 ntBASIC12.93□□□□□ -0.34
Tpm1P58771 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.93□□□□□ -0.34
Tpm1P58771 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Tpm1P58771 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.93□□□□□ -0.34
Tpm1P58771 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.93□□□□□ -0.34
Tpm1P58771 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.93□□□□□ -0.34
Tpm1P58771 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Tpm1P58771 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
Tpm1P58771 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC12.93□□□□□ -0.34
Tpm1P58771 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tpm1P58771 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms