Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.37□□□□□ -0.91
Sssca1P56873 Gm27514-201ENSMUST00000183692 110 ntBASIC9.37□□□□□ -0.91
Sssca1P56873 Gm43133-201ENSMUST00000197472 463 ntBASIC9.37□□□□□ -0.91
Sssca1P56873 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.37□□□□□ -0.91
Sssca1P56873 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.37□□□□□ -0.91
Sssca1P56873 Lect2-202ENSMUST00000225183 823 ntBASIC9.37□□□□□ -0.91
Sssca1P56873 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.37□□□□□ -0.91
Sssca1P56873 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Sssca1P56873 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Sssca1P56873 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Sssca1P56873 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Sssca1P56873 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.37□□□□□ -0.91
Sssca1P56873 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Sssca1P56873 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Sssca1P56873 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.36□□□□□ -0.91
Sssca1P56873 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Sssca1P56873 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.36□□□□□ -0.91
Sssca1P56873 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Sssca1P56873 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.36□□□□□ -0.91
Sssca1P56873 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Sssca1P56873 Gm25214-201ENSMUST00000104573 129 ntBASIC9.36□□□□□ -0.91
Sssca1P56873 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Sssca1P56873 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.36□□□□□ -0.91
Sssca1P56873 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.36□□□□□ -0.91
Sssca1P56873 Gm26956-201ENSMUST00000182176 986 ntBASIC9.36□□□□□ -0.91
Sssca1P56873 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.36□□□□□ -0.91
Sssca1P56873 Gm38158-201ENSMUST00000194617 339 ntBASIC9.36□□□□□ -0.91
Sssca1P56873 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Gm6013-201ENSMUST00000212264 699 ntBASIC9.36□□□□□ -0.91
Sssca1P56873 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.36□□□□□ -0.91
Sssca1P56873 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Sssca1P56873 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Sssca1P56873 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Sssca1P56873 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Sssca1P56873 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Sssca1P56873 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Sssca1P56873 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Sssca1P56873 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.36□□□□□ -0.91
Sssca1P56873 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Sssca1P56873 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.36□□□□□ -0.91
Sssca1P56873 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Sssca1P56873 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Sssca1P56873 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.36□□□□□ -0.91
Sssca1P56873 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sssca1P56873 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Sssca1P56873 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Sssca1P56873 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms