Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.67□□□□□ -0.06
Msh6P54276 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Msh6P54276 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC14.67□□□□□ -0.06
Msh6P54276 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Msh6P54276 Gm17214-201ENSMUST00000164501 541 ntBASIC14.67□□□□□ -0.06
Msh6P54276 Gm7719-201ENSMUST00000182374 975 ntBASIC14.67□□□□□ -0.06
Msh6P54276 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC14.67□□□□□ -0.06
Msh6P54276 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC14.67□□□□□ -0.06
Msh6P54276 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Msh6P54276 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.67□□□□□ -0.06
Msh6P54276 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Msh6P54276 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Msh6P54276 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 AC124397.2-201ENSMUST00000225575 2215 ntBASIC14.67□□□□□ -0.06
Msh6P54276 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.67□□□□□ -0.06
Msh6P54276 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.66□□□□□ -0.06
Msh6P54276 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh6P54276 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh6P54276 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh6P54276 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Msh6P54276 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Msh6P54276 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.66□□□□□ -0.06
Msh6P54276 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Msh6P54276 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh6P54276 Gm11578-201ENSMUST00000118530 459 ntBASIC14.66□□□□□ -0.06
Msh6P54276 Gm12943-201ENSMUST00000119616 210 ntBASIC14.66□□□□□ -0.06
Msh6P54276 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh6P54276 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Msh6P54276 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Msh6P54276 Gm20414-201ENSMUST00000172918 646 ntBASIC14.66□□□□□ -0.06
Msh6P54276 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Msh6P54276 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Msh6P54276 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Msh6P54276 AC122891.1-201ENSMUST00000218671 268 ntBASIC14.66□□□□□ -0.06
Msh6P54276 AC164618.2-201ENSMUST00000224770 573 ntBASIC14.66□□□□□ -0.06
Msh6P54276 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.66□□□□□ -0.06
Msh6P54276 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh6P54276 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh6P54276 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh6P54276 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh6P54276 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Msh6P54276 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Msh6P54276 Matn2-203ENSMUST00000226766 3252 ntBASIC14.66□□□□□ -0.06
Msh6P54276 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.65□□□□□ -0.06
Msh6P54276 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Msh6P54276 Gm12179-201ENSMUST00000118344 1272 ntBASIC14.65□□□□□ -0.06
Msh6P54276 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC14.65□□□□□ -0.06
Msh6P54276 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Gm6855-201ENSMUST00000206307 790 ntBASIC14.65□□□□□ -0.06
Msh6P54276 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 AC153962.2-201ENSMUST00000219417 550 ntBASIC14.65□□□□□ -0.06
Msh6P54276 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Msh6P54276 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.65□□□□□ -0.06
Msh6P54276 Pck2-205ENSMUST00000226352 2784 ntBASIC14.65□□□□□ -0.06
Msh6P54276 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.65□□□□□ -0.06
Msh6P54276 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Msh6P54276 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.07
Msh6P54276 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Msh6P54276 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Msh6P54276 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Gm37600-201ENSMUST00000193764 3292 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
Msh6P54276 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.64□□□□□ -0.07
Msh6P54276 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
Msh6P54276 Gm15528-201ENSMUST00000117821 864 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Gm14213-201ENSMUST00000119778 768 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Gm13019-201ENSMUST00000120000 276 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Gm12453-201ENSMUST00000121981 331 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC14.64□□□□□ -0.07
Msh6P54276 Gm17070-201ENSMUST00000170463 784 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms