Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Mir1982-201ENSMUST00000157368 74 ntBASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm24548-201ENSMUST00000158650 108 ntBASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm5370-201ENSMUST00000187187 574 ntBASIC9.62□□□□□ -0.87
Nkx2-1P50220 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.62□□□□□ -0.87
Nkx2-1P50220 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.61□□□□□ -0.87
Nkx2-1P50220 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.61□□□□□ -0.87
Nkx2-1P50220 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.61□□□□□ -0.87
Nkx2-1P50220 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Gm12058-201ENSMUST00000118614 437 ntBASIC9.61□□□□□ -0.87
Nkx2-1P50220 Gm7809-201ENSMUST00000153199 742 ntBASIC9.61□□□□□ -0.87
Nkx2-1P50220 Gm3890-201ENSMUST00000182416 207 ntBASIC9.61□□□□□ -0.87
Nkx2-1P50220 Gm27514-201ENSMUST00000183692 110 ntBASIC9.61□□□□□ -0.87
Nkx2-1P50220 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Lect2-202ENSMUST00000225183 823 ntBASIC9.61□□□□□ -0.87
Nkx2-1P50220 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.61□□□□□ -0.87
Nkx2-1P50220 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.61□□□□□ -0.87
Nkx2-1P50220 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms