Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox18P43680 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox18P43680 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sox18P43680 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sox18P43680 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sox18P43680 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sox18P43680 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Sox18P43680 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Sox18P43680 Gm11835-201ENSMUST00000120635 663 ntBASIC11.41□□□□□ -0.58
Sox18P43680 Gm12030-201ENSMUST00000121917 223 ntBASIC11.41□□□□□ -0.58
Sox18P43680 Gm22985-201ENSMUST00000122754 116 ntBASIC11.41□□□□□ -0.58
Sox18P43680 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Gm22146-201ENSMUST00000157397 288 ntBASIC11.41□□□□□ -0.58
Sox18P43680 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Gm26134-201ENSMUST00000178484 110 ntBASIC11.41□□□□□ -0.58
Sox18P43680 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC11.41□□□□□ -0.58
Sox18P43680 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.41□□□□□ -0.58
Sox18P43680 Gm38250-202ENSMUST00000195108 462 ntTSL 3 BASIC11.41□□□□□ -0.58
Sox18P43680 Gm8920-201ENSMUST00000196153 924 ntBASIC11.41□□□□□ -0.58
Sox18P43680 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Gm44647-201ENSMUST00000207402 428 ntBASIC11.41□□□□□ -0.58
Sox18P43680 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.41□□□□□ -0.58
Sox18P43680 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox18P43680 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.41□□□□□ -0.58
Sox18P43680 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sox18P43680 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
Sox18P43680 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sox18P43680 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sox18P43680 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.41□□□□□ -0.58
Sox18P43680 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sox18P43680 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.41□□□□□ -0.58
Sox18P43680 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.41□□□□□ -0.58
Sox18P43680 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC11.41□□□□□ -0.58
Sox18P43680 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Sox18P43680 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox18P43680 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox18P43680 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox18P43680 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Sox18P43680 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.4□□□□□ -0.58
Sox18P43680 Gm16147-201ENSMUST00000162143 373 ntBASIC11.4□□□□□ -0.58
Sox18P43680 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.4□□□□□ -0.58
Sox18P43680 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Gm18348-201ENSMUST00000191227 820 ntBASIC11.4□□□□□ -0.58
Sox18P43680 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC11.4□□□□□ -0.58
Sox18P43680 Gm37490-201ENSMUST00000195566 724 ntBASIC11.4□□□□□ -0.58
Sox18P43680 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.4□□□□□ -0.58
Sox18P43680 Gm43997-201ENSMUST00000203986 1005 ntBASIC11.4□□□□□ -0.58
Sox18P43680 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC11.4□□□□□ -0.58
Sox18P43680 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms