Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox6P40645 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.94□□□□□ -0.66
Sox6P40645 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.94□□□□□ -0.66
Sox6P40645 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sox6P40645 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox6P40645 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Sox6P40645 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sox6P40645 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.94□□□□□ -0.66
Sox6P40645 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.94□□□□□ -0.66
Sox6P40645 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sox6P40645 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Sox6P40645 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sox6P40645 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.93□□□□□ -0.66
Sox6P40645 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Sox6P40645 Gm22323-201ENSMUST00000103832 109 ntBASIC10.93□□□□□ -0.66
Sox6P40645 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox6P40645 Gm12015-201ENSMUST00000117065 843 ntBASIC10.93□□□□□ -0.66
Sox6P40645 Gm11439-201ENSMUST00000118598 409 ntBASIC10.93□□□□□ -0.66
Sox6P40645 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.93□□□□□ -0.66
Sox6P40645 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sox6P40645 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox6P40645 Mir6420-201ENSMUST00000185032 102 ntBASIC10.93□□□□□ -0.66
Sox6P40645 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.93□□□□□ -0.66
Sox6P40645 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.93□□□□□ -0.66
Sox6P40645 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.93□□□□□ -0.66
Sox6P40645 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox6P40645 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox6P40645 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox6P40645 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.93□□□□□ -0.66
Sox6P40645 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox6P40645 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox6P40645 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Sox6P40645 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sox6P40645 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sox6P40645 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.92□□□□□ -0.66
Sox6P40645 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Sox6P40645 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox6P40645 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Sox6P40645 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sox6P40645 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sox6P40645 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Gm26083-201ENSMUST00000157904 193 ntBASIC10.92□□□□□ -0.66
Sox6P40645 Gm5070-201ENSMUST00000177599 862 ntBASIC10.92□□□□□ -0.66
Sox6P40645 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms