Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.25□□□□□ -0.61
TfamP40630 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.25□□□□□ -0.61
TfamP40630 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Gm22133-201ENSMUST00000102082 109 ntBASIC11.25□□□□□ -0.61
TfamP40630 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Gm15276-201ENSMUST00000145953 498 ntBASIC11.25□□□□□ -0.61
TfamP40630 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.25□□□□□ -0.61
TfamP40630 Gm25700-201ENSMUST00000177693 110 ntBASIC11.25□□□□□ -0.61
TfamP40630 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.25□□□□□ -0.61
TfamP40630 Gm43758-201ENSMUST00000199500 367 ntBASIC11.25□□□□□ -0.61
TfamP40630 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.25□□□□□ -0.61
TfamP40630 Gm13097-201ENSMUST00000210722 397 ntBASIC11.25□□□□□ -0.61
TfamP40630 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Lect2-202ENSMUST00000225183 823 ntBASIC11.25□□□□□ -0.61
TfamP40630 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Erich3-203ENSMUST00000189969 3460 ntBASIC11.25□□□□□ -0.61
TfamP40630 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.25□□□□□ -0.61
TfamP40630 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TfamP40630 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.25□□□□□ -0.61
TfamP40630 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TfamP40630 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
TfamP40630 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TfamP40630 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TfamP40630 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.24□□□□□ -0.61
TfamP40630 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
TfamP40630 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TfamP40630 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.24□□□□□ -0.61
TfamP40630 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.24□□□□□ -0.61
TfamP40630 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TfamP40630 Gm20482-202ENSMUST00000174729 825 ntBASIC11.24□□□□□ -0.61
TfamP40630 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TfamP40630 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.24□□□□□ -0.61
TfamP40630 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.24□□□□□ -0.61
TfamP40630 Gm38317-201ENSMUST00000195564 343 ntBASIC11.24□□□□□ -0.61
TfamP40630 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.24□□□□□ -0.61
TfamP40630 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.24□□□□□ -0.61
TfamP40630 Gm43822-201ENSMUST00000200285 476 ntBASIC11.24□□□□□ -0.61
TfamP40630 Gm43630-201ENSMUST00000201550 776 ntBASIC11.24□□□□□ -0.61
TfamP40630 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TfamP40630 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.24□□□□□ -0.61
TfamP40630 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TfamP40630 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TfamP40630 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.24□□□□□ -0.61
TfamP40630 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
TfamP40630 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TfamP40630 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
TfamP40630 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TfamP40630 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TfamP40630 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TfamP40630 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TfamP40630 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TfamP40630 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.23□□□□□ -0.61
TfamP40630 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TfamP40630 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.23□□□□□ -0.61
TfamP40630 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TfamP40630 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
TfamP40630 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.23□□□□□ -0.61
TfamP40630 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TfamP40630 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TfamP40630 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
TfamP40630 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.23□□□□□ -0.61
TfamP40630 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TfamP40630 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TfamP40630 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.23□□□□□ -0.61
TfamP40630 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.23□□□□□ -0.61
TfamP40630 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms