Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.95□□□□□ -0.5
Cxcl12P40224 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cxcl12P40224 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Cxcl12P40224 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm42432-201ENSMUST00000197902 1617 ntBASIC11.94□□□□□ -0.5
Cxcl12P40224 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm15528-201ENSMUST00000117821 864 ntBASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm12418-201ENSMUST00000118116 942 ntBASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm15136-201ENSMUST00000120552 533 ntBASIC11.94□□□□□ -0.5
Cxcl12P40224 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cxcl12P40224 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm42751-201ENSMUST00000198065 559 ntBASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm43506-201ENSMUST00000200675 753 ntBASIC11.94□□□□□ -0.5
Cxcl12P40224 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm9102-201ENSMUST00000219250 465 ntBASIC11.94□□□□□ -0.5
Cxcl12P40224 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.94□□□□□ -0.5
Cxcl12P40224 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl12P40224 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.94□□□□□ -0.5
Cxcl12P40224 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.94□□□□□ -0.5
Cxcl12P40224 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.94□□□□□ -0.5
Cxcl12P40224 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl12P40224 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Cxcl12P40224 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl12P40224 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl12P40224 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl12P40224 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl12P40224 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl12P40224 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.93□□□□□ -0.5
Cxcl12P40224 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl12P40224 Gm26119-201ENSMUST00000175601 104 ntBASIC11.93□□□□□ -0.5
Cxcl12P40224 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cxcl12P40224 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cxcl12P40224 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.93□□□□□ -0.5
Cxcl12P40224 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl12P40224 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl12P40224 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.93□□□□□ -0.5
Cxcl12P40224 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.93□□□□□ -0.5
Cxcl12P40224 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms