Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Upk2P38575 Mir6420-201ENSMUST00000185032 102 ntBASIC10.18□□□□□ -0.78
Upk2P38575 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.18□□□□□ -0.78
Upk2P38575 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Gm38151-201ENSMUST00000195085 289 ntBASIC10.18□□□□□ -0.78
Upk2P38575 Gm43438-201ENSMUST00000198133 379 ntBASIC10.18□□□□□ -0.78
Upk2P38575 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Upk2P38575 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.18□□□□□ -0.78
Upk2P38575 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.18□□□□□ -0.78
Upk2P38575 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Upk2P38575 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Upk2P38575 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Upk2P38575 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Upk2P38575 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.18□□□□□ -0.78
Upk2P38575 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Upk2P38575 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Upk2P38575 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Upk2P38575 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Upk2P38575 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Upk2P38575 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk2P38575 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.17□□□□□ -0.78
Upk2P38575 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.17□□□□□ -0.78
Upk2P38575 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Upk2P38575 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Upk2P38575 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Upk2P38575 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Upk2P38575 Gm12501-201ENSMUST00000119163 529 ntBASIC10.17□□□□□ -0.78
Upk2P38575 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Upk2P38575 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.17□□□□□ -0.78
Upk2P38575 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.17□□□□□ -0.78
Upk2P38575 Gm13263-201ENSMUST00000121271 838 ntBASIC10.17□□□□□ -0.78
Upk2P38575 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Gm18734-201ENSMUST00000172937 808 ntBASIC10.17□□□□□ -0.78
Upk2P38575 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.17□□□□□ -0.78
Upk2P38575 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.17□□□□□ -0.78
Upk2P38575 Gm4482-201ENSMUST00000200876 742 ntBASIC10.17□□□□□ -0.78
Upk2P38575 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Gm4978-201ENSMUST00000071565 801 ntBASIC10.17□□□□□ -0.78
Upk2P38575 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Upk2P38575 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.17□□□□□ -0.78
Upk2P38575 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.17□□□□□ -0.78
Upk2P38575 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.17□□□□□ -0.78
Upk2P38575 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.17□□□□□ -0.78
Upk2P38575 Erich3-203ENSMUST00000189969 3460 ntBASIC10.17□□□□□ -0.78
Upk2P38575 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk2P38575 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.17□□□□□ -0.78
Upk2P38575 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.17□□□□□ -0.78
Upk2P38575 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.16□□□□□ -0.78
Upk2P38575 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Upk2P38575 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Upk2P38575 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms