Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.99□□□□□ -0.49
Nfkb1P25799 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nfkb1P25799 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Nfkb1P25799 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.98□□□□□ -0.49
Nfkb1P25799 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Nfkb1P25799 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.98□□□□□ -0.49
Nfkb1P25799 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Nfkb1P25799 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nfkb1P25799 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.98□□□□□ -0.49
Nfkb1P25799 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.98□□□□□ -0.49
Nfkb1P25799 Gm5982-201ENSMUST00000196234 512 ntBASIC11.98□□□□□ -0.49
Nfkb1P25799 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Gm43852-201ENSMUST00000202098 917 ntBASIC11.98□□□□□ -0.49
Nfkb1P25799 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Nfkb1P25799 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.98□□□□□ -0.49
Nfkb1P25799 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.98□□□□□ -0.49
Nfkb1P25799 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nfkb1P25799 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nfkb1P25799 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.98□□□□□ -0.49
Nfkb1P25799 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.98□□□□□ -0.49
Nfkb1P25799 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nfkb1P25799 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Gm1848-201ENSMUST00000120711 789 ntBASIC11.97□□□□□ -0.49
Nfkb1P25799 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Gm22138-201ENSMUST00000158748 128 ntBASIC11.97□□□□□ -0.49
Nfkb1P25799 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.97□□□□□ -0.49
Nfkb1P25799 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.97□□□□□ -0.49
Nfkb1P25799 Gm45219-201ENSMUST00000205602 465 ntBASIC11.97□□□□□ -0.49
Nfkb1P25799 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nfkb1P25799 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nfkb1P25799 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nfkb1P25799 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.97□□□□□ -0.49
Nfkb1P25799 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms