Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Sdc1P18828 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sdc1P18828 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.48□□□□□ -0.89
Sdc1P18828 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Sdc1P18828 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC9.47□□□□□ -0.89
Sdc1P18828 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC9.47□□□□□ -0.89
Sdc1P18828 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.47□□□□□ -0.89
Sdc1P18828 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC9.47□□□□□ -0.89
Sdc1P18828 Gm45195-201ENSMUST00000205597 1008 ntBASIC9.47□□□□□ -0.89
Sdc1P18828 Gm45930-201ENSMUST00000221330 292 ntBASIC9.47□□□□□ -0.89
Sdc1P18828 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Sdc1P18828 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Gm8396-201ENSMUST00000057361 823 ntBASIC9.47□□□□□ -0.89
Sdc1P18828 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Nln-205ENSMUST00000224945 2486 ntBASIC9.47□□□□□ -0.89
Sdc1P18828 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.47□□□□□ -0.89
Sdc1P18828 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sdc1P18828 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Sdc1P18828 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.46□□□□□ -0.89
Sdc1P18828 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.46□□□□□ -0.89
Sdc1P18828 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.46□□□□□ -0.89
Sdc1P18828 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sdc1P18828 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sdc1P18828 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Sdc1P18828 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Sdc1P18828 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Sdc1P18828 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sdc1P18828 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sdc1P18828 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Sdc1P18828 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sdc1P18828 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.46□□□□□ -0.89
Sdc1P18828 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.89
Sdc1P18828 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Sdc1P18828 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
Sdc1P18828 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sdc1P18828 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Sdc1P18828 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sdc1P18828 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Sdc1P18828 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Sdc1P18828 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Sdc1P18828 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Sdc1P18828 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC9.46□□□□□ -0.9
Sdc1P18828 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Sdc1P18828 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Sdc1P18828 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Sdc1P18828 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.46□□□□□ -0.9
Sdc1P18828 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.46□□□□□ -0.9
Sdc1P18828 Mir7654-201ENSMUST00000185082 70 ntBASIC9.46□□□□□ -0.9
Sdc1P18828 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Sdc1P18828 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC9.46□□□□□ -0.9
Sdc1P18828 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Sdc1P18828 Gm37597-201ENSMUST00000191853 382 ntBASIC9.46□□□□□ -0.9
Sdc1P18828 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms