Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.32□□□□□ -0.92
Hoxd3P09027 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.32□□□□□ -0.92
Hoxd3P09027 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.32□□□□□ -0.92
Hoxd3P09027 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC9.32□□□□□ -0.92
Hoxd3P09027 Gm4540-201ENSMUST00000170669 429 ntBASIC9.32□□□□□ -0.92
Hoxd3P09027 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.32□□□□□ -0.92
Hoxd3P09027 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.32□□□□□ -0.92
Hoxd3P09027 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.32□□□□□ -0.92
Hoxd3P09027 Gm43811-201ENSMUST00000202862 695 ntBASIC9.32□□□□□ -0.92
Hoxd3P09027 Gm4607-201ENSMUST00000206649 577 ntBASIC9.32□□□□□ -0.92
Hoxd3P09027 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.32□□□□□ -0.92
Hoxd3P09027 Gm4157-201ENSMUST00000211647 679 ntBASIC9.32□□□□□ -0.92
Hoxd3P09027 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.32□□□□□ -0.92
Hoxd3P09027 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC9.32□□□□□ -0.92
Hoxd3P09027 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 AC154515.3-201ENSMUST00000225081 1159 ntBASIC9.32□□□□□ -0.92
Hoxd3P09027 AC121567.1-201ENSMUST00000227213 842 ntBASIC9.32□□□□□ -0.92
Hoxd3P09027 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Hoxd3P09027 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Gm26448-201ENSMUST00000082446 203 ntBASIC9.32□□□□□ -0.92
Hoxd3P09027 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Zfp125-201ENSMUST00000079237 2488 ntBASIC9.32□□□□□ -0.92
Hoxd3P09027 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Hoxd3P09027 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC9.32□□□□□ -0.92
Hoxd3P09027 Gm42975-201ENSMUST00000200612 1491 ntBASIC9.32□□□□□ -0.92
Hoxd3P09027 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Hoxd3P09027 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Hoxd3P09027 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Hoxd3P09027 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxd3P09027 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Gm12501-201ENSMUST00000119163 529 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Mir669a-7-201ENSMUST00000180364 87 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Mir669a-6-201ENSMUST00000196127 87 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Mir669a-12-201ENSMUST00000197274 87 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Mir669a-5-201ENSMUST00000197439 87 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Mir669a-10-201ENSMUST00000197745 87 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Mir669a-11-201ENSMUST00000197952 87 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Mir669a-4-201ENSMUST00000198665 87 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Mir669a-9-201ENSMUST00000200087 87 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Mir669a-8-201ENSMUST00000200268 87 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Gm8956-201ENSMUST00000203939 825 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Gm44681-201ENSMUST00000208447 842 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Gm17910-201ENSMUST00000211038 838 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 AC158392.1-201ENSMUST00000223720 1069 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Gm807-202ENSMUST00000224929 408 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 AC133517.2-201ENSMUST00000226820 690 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 AC116724.1-201ENSMUST00000227900 972 ntBASIC9.31□□□□□ -0.92
Hoxd3P09027 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.31□□□□□ -0.92
Hoxd3P09027 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxd3P09027 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms