Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxa4P06798 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Hoxa4P06798 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxa4P06798 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.46□□□□□ -0.58
Hoxa4P06798 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxa4P06798 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxa4P06798 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxa4P06798 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxa4P06798 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxa4P06798 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxa4P06798 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.46□□□□□ -0.58
Hoxa4P06798 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.45□□□□□ -0.58
Hoxa4P06798 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Gm15374-201ENSMUST00000119313 844 ntBASIC11.45□□□□□ -0.58
Hoxa4P06798 Gm16219-201ENSMUST00000120096 274 ntBASIC11.45□□□□□ -0.58
Hoxa4P06798 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.45□□□□□ -0.58
Hoxa4P06798 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Mir8115-201ENSMUST00000184992 119 ntBASIC11.45□□□□□ -0.58
Hoxa4P06798 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Gm37981-201ENSMUST00000194280 535 ntBASIC11.45□□□□□ -0.58
Hoxa4P06798 Gm43186-201ENSMUST00000198130 824 ntBASIC11.45□□□□□ -0.58
Hoxa4P06798 Gm8959-201ENSMUST00000213150 571 ntBASIC11.45□□□□□ -0.58
Hoxa4P06798 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.45□□□□□ -0.58
Hoxa4P06798 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Hoxa4P06798 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.45□□□□□ -0.58
Hoxa4P06798 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa4P06798 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Hoxa4P06798 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.44□□□□□ -0.58
Hoxa4P06798 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Hoxa4P06798 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Gm11949-201ENSMUST00000117640 372 ntBASIC11.44□□□□□ -0.58
Hoxa4P06798 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.44□□□□□ -0.58
Hoxa4P06798 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxa4P06798 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxa4P06798 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxa4P06798 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hoxa4P06798 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.44□□□□□ -0.58
Hoxa4P06798 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxa4P06798 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxa4P06798 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.44□□□□□ -0.58
Hoxa4P06798 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms