Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.25□□□□□ -0.13
Setdb1O88974 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.25□□□□□ -0.13
Setdb1O88974 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Setdb1O88974 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Setdb1O88974 Gm43334-201ENSMUST00000197740 1318 ntBASIC14.25□□□□□ -0.13
Setdb1O88974 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Setdb1O88974 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Setdb1O88974 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Setdb1O88974 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Setdb1O88974 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Setdb1O88974 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.25□□□□□ -0.13
Setdb1O88974 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Setdb1O88974 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Setdb1O88974 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Setdb1O88974 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Setdb1O88974 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Setdb1O88974 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Setdb1O88974 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Setdb1O88974 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Setdb1O88974 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Setdb1O88974 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Setdb1O88974 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Setdb1O88974 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.24□□□□□ -0.13
Setdb1O88974 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Gm22885-201ENSMUST00000157410 107 ntBASIC14.24□□□□□ -0.13
Setdb1O88974 Gm17214-201ENSMUST00000164501 541 ntBASIC14.24□□□□□ -0.13
Setdb1O88974 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.24□□□□□ -0.13
Setdb1O88974 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Setdb1O88974 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC14.24□□□□□ -0.13
Setdb1O88974 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.24□□□□□ -0.13
Setdb1O88974 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Setdb1O88974 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Setdb1O88974 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.24□□□□□ -0.13
Setdb1O88974 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.24□□□□□ -0.13
Setdb1O88974 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Setdb1O88974 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Setdb1O88974 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.24□□□□□ -0.13
Setdb1O88974 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.23□□□□□ -0.13
Setdb1O88974 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Gm11560-201ENSMUST00000117567 948 ntBASIC14.23□□□□□ -0.13
Setdb1O88974 Gm12712-201ENSMUST00000120676 801 ntBASIC14.23□□□□□ -0.13
Setdb1O88974 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC14.23□□□□□ -0.13
Setdb1O88974 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC14.23□□□□□ -0.13
Setdb1O88974 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Setdb1O88974 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Setdb1O88974 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.23□□□□□ -0.13
Setdb1O88974 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.23□□□□□ -0.13
Setdb1O88974 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.23□□□□□ -0.13
Setdb1O88974 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.23□□□□□ -0.13
Setdb1O88974 Gm18776-201ENSMUST00000188833 654 ntBASIC14.23□□□□□ -0.13
Setdb1O88974 Gm9916-201ENSMUST00000192943 1228 ntBASIC14.23□□□□□ -0.13
Setdb1O88974 Gm37852-201ENSMUST00000193027 350 ntBASIC14.23□□□□□ -0.13
Setdb1O88974 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Gm36943-201ENSMUST00000194422 282 ntBASIC14.23□□□□□ -0.13
Setdb1O88974 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.23□□□□□ -0.13
Setdb1O88974 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Setdb1O88974 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Setdb1O88974 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 AC138716.2-201ENSMUST00000226670 1016 ntBASIC14.23□□□□□ -0.13
Setdb1O88974 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.23□□□□□ -0.13
Setdb1O88974 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.23□□□□□ -0.13
Setdb1O88974 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Setdb1O88974 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Setdb1O88974 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Setdb1O88974 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Setdb1O88974 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms