Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Gm14071-201ENSMUST00000117817 509 ntBASIC9.83□□□□□ -0.84
Cxcl13O55038 Gm12899-201ENSMUST00000120565 551 ntBASIC9.83□□□□□ -0.84
Cxcl13O55038 Gm15549-201ENSMUST00000121595 622 ntBASIC9.83□□□□□ -0.84
Cxcl13O55038 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.83□□□□□ -0.84
Cxcl13O55038 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Mir6998-201ENSMUST00000183343 64 ntBASIC9.83□□□□□ -0.84
Cxcl13O55038 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Gm42518-201ENSMUST00000196277 938 ntBASIC9.83□□□□□ -0.84
Cxcl13O55038 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC9.83□□□□□ -0.84
Cxcl13O55038 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.83□□□□□ -0.84
Cxcl13O55038 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.83□□□□□ -0.84
Cxcl13O55038 AC132901.1-201ENSMUST00000224345 508 ntBASIC9.83□□□□□ -0.84
Cxcl13O55038 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.83□□□□□ -0.84
Cxcl13O55038 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Cxcl13O55038 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cxcl13O55038 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC9.82□□□□□ -0.84
Cxcl13O55038 Mir1901-201ENSMUST00000122616 78 ntBASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm24398-201ENSMUST00000157870 109 ntBASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm8194-201ENSMUST00000159783 859 ntBASIC9.82□□□□□ -0.84
Cxcl13O55038 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm20495-201ENSMUST00000173902 235 ntBASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm43830-201ENSMUST00000198760 1067 ntBASIC9.82□□□□□ -0.84
Cxcl13O55038 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm17825-201ENSMUST00000206836 794 ntBASIC9.82□□□□□ -0.84
Cxcl13O55038 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC9.82□□□□□ -0.84
Cxcl13O55038 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.82□□□□□ -0.84
Cxcl13O55038 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cxcl13O55038 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms