Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hps1O08983 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Hps1O08983 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Hps1O08983 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.87□□□□□ -0.67
Hps1O08983 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Hps1O08983 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.87□□□□□ -0.67
Hps1O08983 Gm8018-201ENSMUST00000173536 789 ntBASIC10.87□□□□□ -0.67
Hps1O08983 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.87□□□□□ -0.67
Hps1O08983 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Hps1O08983 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.87□□□□□ -0.67
Hps1O08983 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Hps1O08983 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.87□□□□□ -0.67
Hps1O08983 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hps1O08983 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.86□□□□□ -0.67
Hps1O08983 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.86□□□□□ -0.67
Hps1O08983 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.86□□□□□ -0.67
Hps1O08983 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.86□□□□□ -0.67
Hps1O08983 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC10.86□□□□□ -0.67
Hps1O08983 Gm11331-201ENSMUST00000119764 288 ntBASIC10.86□□□□□ -0.67
Hps1O08983 Gm12502-201ENSMUST00000120197 444 ntBASIC10.86□□□□□ -0.67
Hps1O08983 Gm11597-201ENSMUST00000121423 964 ntBASIC10.86□□□□□ -0.67
Hps1O08983 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.86□□□□□ -0.67
Hps1O08983 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
Hps1O08983 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.86□□□□□ -0.67
Hps1O08983 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Hps1O08983 Gm27046-201ENSMUST00000182160 463 ntBASIC10.86□□□□□ -0.67
Hps1O08983 Gm27023-201ENSMUST00000182372 285 ntBASIC10.86□□□□□ -0.67
Hps1O08983 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Gm18304-201ENSMUST00000189162 546 ntBASIC10.86□□□□□ -0.67
Hps1O08983 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.86□□□□□ -0.67
Hps1O08983 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC10.86□□□□□ -0.67
Hps1O08983 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.86□□□□□ -0.67
Hps1O08983 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.86□□□□□ -0.67
Hps1O08983 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.86□□□□□ -0.67
Hps1O08983 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.86□□□□□ -0.67
Hps1O08983 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Hps1O08983 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hps1O08983 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.86□□□□□ -0.67
Hps1O08983 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms