Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 AC167022.1-201ENSMUST00000218647 1458 ntBASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm4917-201ENSMUST00000121452 650 ntBASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm2448-201ENSMUST00000207080 559 ntBASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 AC154435.1-201ENSMUST00000223938 959 ntBASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Gm8255-201ENSMUST00000218693 305 ntBASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcf11G3X9Z4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Paupar-201ENSMUST00000194826 3482 ntBASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Gm12129-201ENSMUST00000120104 1147 ntBASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Gm22846-201ENSMUST00000157706 270 ntBASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Gm27956-201ENSMUST00000175604 260 ntBASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Gm42815-201ENSMUST00000198787 1470 ntBASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcf11G3X9Z4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Gm5555-201ENSMUST00000120352 1111 ntBASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Gm5257-201ENSMUST00000121823 790 ntBASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Snord55-201ENSMUST00000174939 79 ntBASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Gm18806-201ENSMUST00000207607 1775 ntBASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcf11G3X9Z4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Gm22344-201ENSMUST00000122642 278 ntBASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Gm18801-201ENSMUST00000186616 536 ntBASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Gm43564-201ENSMUST00000196185 211 ntBASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Gm4903-201ENSMUST00000210462 405 ntBASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms