Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Arhgef33-210ENSMUST00000225548 456 ntBASIC10.95□□□□□ -0.66
Colca2F8VPY8 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Colca2F8VPY8 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Colca2F8VPY8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Colca2F8VPY8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Colca2F8VPY8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.95□□□□□ -0.66
Colca2F8VPY8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Colca2F8VPY8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Colca2F8VPY8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Colca2F8VPY8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Colca2F8VPY8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Colca2F8VPY8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Colca2F8VPY8 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Colca2F8VPY8 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Colca2F8VPY8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Colca2F8VPY8 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.94□□□□□ -0.66
Colca2F8VPY8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gm12912-201ENSMUST00000121596 1381 ntBASIC10.94□□□□□ -0.66
Colca2F8VPY8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gm6612-201ENSMUST00000170777 395 ntBASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.94□□□□□ -0.66
Colca2F8VPY8 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.94□□□□□ -0.66
Colca2F8VPY8 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Colca2F8VPY8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Colca2F8VPY8 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Colca2F8VPY8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Colca2F8VPY8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.93□□□□□ -0.66
Colca2F8VPY8 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.93□□□□□ -0.66
Colca2F8VPY8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Colca2F8VPY8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Colca2F8VPY8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Colca2F8VPY8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Colca2F8VPY8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Colca2F8VPY8 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Colca2F8VPY8 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Colca2F8VPY8 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Colca2F8VPY8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.93□□□□□ -0.66
Colca2F8VPY8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Colca2F8VPY8 AC022682.1-201ENSMUST00000224624 2023 ntBASIC10.93□□□□□ -0.66
Colca2F8VPY8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Colca2F8VPY8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Colca2F8VPY8 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Colca2F8VPY8 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC10.93□□□□□ -0.66
Colca2F8VPY8 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms