Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Gm9230-201ENSMUST00000188228 532 ntBASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Gm4607-201ENSMUST00000206649 577 ntBASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Gm8712-201ENSMUST00000221090 701 ntBASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Pcdh1F7BJK1 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Gm11511-201ENSMUST00000118146 540 ntBASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Gm15004-201ENSMUST00000119192 630 ntBASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Gm11793-201ENSMUST00000120433 981 ntBASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Morn2-202ENSMUST00000227729 656 ntBASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh1F7BJK1 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms