Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Gm16166-201ENSMUST00000118291 787 ntBASIC11.84□□□□□ -0.51
Ccdc149F6V035 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.84□□□□□ -0.51
Ccdc149F6V035 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc149F6V035 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc149F6V035 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc149F6V035 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc149F6V035 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.84□□□□□ -0.51
Ccdc149F6V035 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.84□□□□□ -0.51
Ccdc149F6V035 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.84□□□□□ -0.51
Ccdc149F6V035 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc149F6V035 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc149F6V035 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc149F6V035 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc149F6V035 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.83□□□□□ -0.52
Ccdc149F6V035 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Gm24398-201ENSMUST00000157870 109 ntBASIC11.83□□□□□ -0.52
Ccdc149F6V035 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Gm42657-201ENSMUST00000201746 211 ntBASIC11.83□□□□□ -0.52
Ccdc149F6V035 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.83□□□□□ -0.52
Ccdc149F6V035 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc149F6V035 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc149F6V035 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Gm11700-201ENSMUST00000119409 403 ntBASIC11.82□□□□□ -0.52
Ccdc149F6V035 Gm12899-201ENSMUST00000120565 551 ntBASIC11.82□□□□□ -0.52
Ccdc149F6V035 Gm11960-201ENSMUST00000122068 925 ntBASIC11.82□□□□□ -0.52
Ccdc149F6V035 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Gm23680-201ENSMUST00000083162 164 ntBASIC11.82□□□□□ -0.52
Ccdc149F6V035 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc149F6V035 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms