Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nkx6-2D3Z4R4 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nkx6-2D3Z4R4 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.37□□□□□ -0.91
Nkx6-2D3Z4R4 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.37□□□□□ -0.91
Nkx6-2D3Z4R4 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC9.37□□□□□ -0.91
Nkx6-2D3Z4R4 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nkx6-2D3Z4R4 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nkx6-2D3Z4R4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nkx6-2D3Z4R4 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nkx6-2D3Z4R4 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nkx6-2D3Z4R4 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm15953-201ENSMUST00000117656 1732 ntBASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Fgf17-202ENSMUST00000227123 1336 ntBASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm37597-201ENSMUST00000191853 382 ntBASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Itm2b-204ENSMUST00000228637 783 ntBASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm18630-201ENSMUST00000222109 1397 ntBASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx6-2D3Z4R4 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Gm15376-201ENSMUST00000122258 783 ntBASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Gm7775-201ENSMUST00000218871 853 ntBASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms