Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
ClcnkaQ9WUB7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm14017-201ENSMUST00000121934 386 ntBASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm6114-201ENSMUST00000182472 968 ntBASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm7003-201ENSMUST00000195089 312 ntBASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm43184-201ENSMUST00000197247 542 ntBASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm45186-201ENSMUST00000206874 478 ntBASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.76□□□□□ -0.69
ClcnkaQ9WUB7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Gm23949-201ENSMUST00000104027 127 ntBASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Gm15711-201ENSMUST00000118889 535 ntBASIC10.75□□□□□ -0.69
ClcnkaQ9WUB7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms