Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.61□□□□□ -0.23
Scn11aQ9R053 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scn11aQ9R053 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn11aQ9R053 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Snord23-201ENSMUST00000116828 109 ntBASIC13.6□□□□□ -0.23
Scn11aQ9R053 Gm12663-201ENSMUST00000118481 958 ntBASIC13.6□□□□□ -0.23
Scn11aQ9R053 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Gm4930-201ENSMUST00000219926 1087 ntBASIC13.6□□□□□ -0.23
Scn11aQ9R053 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.6□□□□□ -0.23
Scn11aQ9R053 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.6□□□□□ -0.23
Scn11aQ9R053 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Mir3060-201ENSMUST00000175339 83 ntBASIC13.6□□□□□ -0.23
Scn11aQ9R053 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Gm7238-201ENSMUST00000206467 973 ntBASIC13.6□□□□□ -0.23
Scn11aQ9R053 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn11aQ9R053 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.59□□□□□ -0.23
Scn11aQ9R053 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Gm11957-201ENSMUST00000118304 779 ntBASIC13.59□□□□□ -0.23
Scn11aQ9R053 Gm16459-201ENSMUST00000121443 686 ntBASIC13.59□□□□□ -0.23
Scn11aQ9R053 Gm13445-201ENSMUST00000121664 307 ntBASIC13.59□□□□□ -0.23
Scn11aQ9R053 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Gm24943-201ENSMUST00000158329 433 ntBASIC13.59□□□□□ -0.23
Scn11aQ9R053 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Gm19927-201ENSMUST00000185792 781 ntBASIC13.59□□□□□ -0.23
Scn11aQ9R053 Gm17796-201ENSMUST00000189015 1213 ntBASIC13.59□□□□□ -0.23
Scn11aQ9R053 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Scn11aQ9R053 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.59□□□□□ -0.23
Scn11aQ9R053 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn11aQ9R053 AC164429.1-201ENSMUST00000224210 518 ntBASIC13.59□□□□□ -0.23
Scn11aQ9R053 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Scn11aQ9R053 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scn11aQ9R053 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.58□□□□□ -0.23
Scn11aQ9R053 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.58□□□□□ -0.23
Scn11aQ9R053 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms