Protein–RNA interactions for Protein: Q9QZD4

Ercc4, DNA repair endonuclease XPF, mousemouse

Predictions only

Length 917 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4Q9QZD4 Gm11509-201ENSMUST00000117358 325 ntBASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Gm19891-201ENSMUST00000189771 303 ntBASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Gm45331-201ENSMUST00000209868 554 ntBASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.61□□□□□ -0.39
Ercc4Q9QZD4 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Gm26286-201ENSMUST00000104166 134 ntBASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Gm11511-201ENSMUST00000118146 540 ntBASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Mir1938-201ENSMUST00000158746 100 ntBASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Gm3961-201ENSMUST00000204425 994 ntBASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ercc4Q9QZD4 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Gm22323-201ENSMUST00000103832 109 ntBASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Gm14381-201ENSMUST00000122105 414 ntBASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Gm17376-201ENSMUST00000166016 84 ntBASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Gm37259-201ENSMUST00000193903 849 ntBASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Gm44651-201ENSMUST00000207343 372 ntBASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Olfr582-201ENSMUST00000098212 960 ntBASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ercc4Q9QZD4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms