Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
OtofQ9ESF1 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
OtofQ9ESF1 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
OtofQ9ESF1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
OtofQ9ESF1 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
OtofQ9ESF1 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.5□□□□□ -0.57
OtofQ9ESF1 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
OtofQ9ESF1 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
OtofQ9ESF1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
OtofQ9ESF1 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
OtofQ9ESF1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
OtofQ9ESF1 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
OtofQ9ESF1 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.49□□□□□ -0.57
OtofQ9ESF1 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Gm25880-201ENSMUST00000104331 132 ntBASIC11.49□□□□□ -0.57
OtofQ9ESF1 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Gm15617-201ENSMUST00000118973 771 ntBASIC11.49□□□□□ -0.57
OtofQ9ESF1 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.49□□□□□ -0.57
OtofQ9ESF1 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Gm19587-201ENSMUST00000191395 545 ntBASIC11.49□□□□□ -0.57
OtofQ9ESF1 Gm30946-201ENSMUST00000198288 724 ntBASIC11.49□□□□□ -0.57
OtofQ9ESF1 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.49□□□□□ -0.57
OtofQ9ESF1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
OtofQ9ESF1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm3329-201ENSMUST00000159873 556 ntBASIC11.48□□□□□ -0.57
OtofQ9ESF1 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.48□□□□□ -0.57
OtofQ9ESF1 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.48□□□□□ -0.57
OtofQ9ESF1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.48□□□□□ -0.57
OtofQ9ESF1 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.48□□□□□ -0.57
OtofQ9ESF1 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm12218-201ENSMUST00000117666 399 ntBASIC11.48□□□□□ -0.57
OtofQ9ESF1 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.48□□□□□ -0.57
OtofQ9ESF1 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm25554-201ENSMUST00000158075 113 ntBASIC11.48□□□□□ -0.57
OtofQ9ESF1 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm26134-201ENSMUST00000178484 110 ntBASIC11.48□□□□□ -0.57
OtofQ9ESF1 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
OtofQ9ESF1 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms