Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmgn3Q9DCB1 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm9192-201ENSMUST00000183221 985 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm27847-201ENSMUST00000183711 107 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm27375-201ENSMUST00000183799 107 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm27839-201ENSMUST00000184242 106 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Erich3-203ENSMUST00000189969 3460 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hmgn3Q9DCB1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hmgn3Q9DCB1 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms