Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Gm24891-201ENSMUST00000104391 136 ntBASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Gm14724-201ENSMUST00000118400 537 ntBASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Mir6979-201ENSMUST00000183927 56 ntBASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chmp2aQ9DB34 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chmp2aQ9DB34 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.15□□□□□ -0.47
Chmp2aQ9DB34 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.15□□□□□ -0.47
Chmp2aQ9DB34 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Chmp2aQ9DB34 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chmp2aQ9DB34 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gm11700-201ENSMUST00000119409 403 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gm12566-201ENSMUST00000121479 359 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gm26461-201ENSMUST00000175064 290 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gm28937-201ENSMUST00000185413 695 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gm29400-201ENSMUST00000187208 695 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gm28662-201ENSMUST00000188446 695 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gm28251-201ENSMUST00000188835 695 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gm37318-201ENSMUST00000194325 695 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gm38017-201ENSMUST00000194768 695 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gm37287-201ENSMUST00000195449 695 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gm37793-201ENSMUST00000195548 695 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gm4482-201ENSMUST00000200876 742 ntBASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp2aQ9DB34 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Gm23251-201ENSMUST00000103773 110 ntBASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Gm7851-201ENSMUST00000117574 323 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms