Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Gm14630-201ENSMUST00000118057 246 ntBASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Gm14153-201ENSMUST00000119923 1139 ntBASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Gm25694-201ENSMUST00000175448 282 ntBASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lysmd1Q9D0E3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Gm12047-201ENSMUST00000117561 944 ntBASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Gm22616-201ENSMUST00000179783 100 ntBASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Gm3945-201ENSMUST00000196637 683 ntBASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Gm18555-201ENSMUST00000197935 584 ntBASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Gm15599-201ENSMUST00000122283 1345 ntBASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lysmd1Q9D0E3 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lysmd1Q9D0E3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.33□□□□□ -0.43
Lysmd1Q9D0E3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Lysmd1Q9D0E3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Gm15033-201ENSMUST00000118188 673 ntBASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms