Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm25261-201ENSMUST00000157416 134 ntBASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Gm28882-201ENSMUST00000185504 314 ntBASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Gm43002-201ENSMUST00000200310 155 ntBASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim13Q9CYB0 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim13Q9CYB0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.77□□□□□ -0.68
Trim13Q9CYB0 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim13Q9CYB0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim13Q9CYB0 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Trim13Q9CYB0 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Gm13875-201ENSMUST00000120162 282 ntBASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Snora78-201ENSMUST00000158630 128 ntBASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.77□□□□□ -0.69
Trim13Q9CYB0 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Snora73a-201ENSMUST00000082453 205 ntBASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim13Q9CYB0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Gm14363-201ENSMUST00000122304 409 ntBASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms