Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.52□□□□□ -0.25
Smc1bQ920F6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Gm26286-201ENSMUST00000104166 134 ntBASIC13.51□□□□□ -0.25
Smc1bQ920F6 Gm15352-201ENSMUST00000118696 270 ntBASIC13.51□□□□□ -0.25
Smc1bQ920F6 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.51□□□□□ -0.25
Smc1bQ920F6 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.51□□□□□ -0.25
Smc1bQ920F6 Gm23045-201ENSMUST00000175041 96 ntBASIC13.51□□□□□ -0.25
Smc1bQ920F6 Gm9022-201ENSMUST00000182482 992 ntBASIC13.51□□□□□ -0.25
Smc1bQ920F6 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.51□□□□□ -0.25
Smc1bQ920F6 Gm43520-201ENSMUST00000197996 164 ntBASIC13.51□□□□□ -0.25
Smc1bQ920F6 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.51□□□□□ -0.25
Smc1bQ920F6 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smc1bQ920F6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.5□□□□□ -0.25
Smc1bQ920F6 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Gm11663-201ENSMUST00000117888 290 ntBASIC13.5□□□□□ -0.25
Smc1bQ920F6 Gm16071-201ENSMUST00000119589 793 ntBASIC13.5□□□□□ -0.25
Smc1bQ920F6 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Gm28686-201ENSMUST00000187404 609 ntBASIC13.5□□□□□ -0.25
Smc1bQ920F6 Gm17826-201ENSMUST00000189720 798 ntBASIC13.5□□□□□ -0.25
Smc1bQ920F6 Gm44329-201ENSMUST00000197469 112 ntBASIC13.5□□□□□ -0.25
Smc1bQ920F6 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.5□□□□□ -0.25
Smc1bQ920F6 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.5□□□□□ -0.25
Smc1bQ920F6 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Gm8325-201ENSMUST00000099086 453 ntBASIC13.5□□□□□ -0.25
Smc1bQ920F6 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.5□□□□□ -0.25
Smc1bQ920F6 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Smc1bQ920F6 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms