Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm43378-201ENSMUST00000199336 582 ntBASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdha3Q91Y16 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdha3Q91Y16 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Pcdha3Q91Y16 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdha3Q91Y16 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdha3Q91Y16 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdha3Q91Y16 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm12566-201ENSMUST00000121479 359 ntBASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Mir5132-201ENSMUST00000175166 71 ntBASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm28686-201ENSMUST00000187404 609 ntBASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm18827-201ENSMUST00000188341 790 ntBASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm6905-201ENSMUST00000205729 511 ntBASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdha3Q91Y16 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Gm15515-201ENSMUST00000117827 822 ntBASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Gm11700-201ENSMUST00000119409 403 ntBASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Gm8815-201ENSMUST00000173809 620 ntBASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Gm18753-201ENSMUST00000201000 566 ntBASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Nsd1-205ENSMUST00000224693 852 ntBASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdha3Q91Y16 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms