Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Gm43531-201ENSMUST00000200676 1114 ntBASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Gm19163-201ENSMUST00000223313 780 ntBASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Mir339-201ENSMUST00000083659 96 ntBASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb3Q91XZ7 Gm37960-201ENSMUST00000192402 1897 ntBASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm16379-201ENSMUST00000161469 348 ntBASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm17208-201ENSMUST00000168388 535 ntBASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm8762-201ENSMUST00000193486 339 ntBASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm42627-201ENSMUST00000197347 224 ntBASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm43118-201ENSMUST00000199149 775 ntBASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm8099-201ENSMUST00000200510 742 ntBASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm43894-201ENSMUST00000203274 688 ntBASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb3Q91XZ7 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms