Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TraipQ8VIG6 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.53□□□□□ -0.4
TraipQ8VIG6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.53□□□□□ -0.4
TraipQ8VIG6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.53□□□□□ -0.4
TraipQ8VIG6 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Gm22442-201ENSMUST00000157256 144 ntBASIC12.53□□□□□ -0.4
TraipQ8VIG6 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 CT009764.1-201ENSMUST00000222260 483 ntBASIC12.53□□□□□ -0.4
TraipQ8VIG6 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.53□□□□□ -0.4
TraipQ8VIG6 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TraipQ8VIG6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
TraipQ8VIG6 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TraipQ8VIG6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
TraipQ8VIG6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TraipQ8VIG6 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TraipQ8VIG6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TraipQ8VIG6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TraipQ8VIG6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TraipQ8VIG6 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
TraipQ8VIG6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TraipQ8VIG6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TraipQ8VIG6 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TraipQ8VIG6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TraipQ8VIG6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TraipQ8VIG6 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Gm4294-201ENSMUST00000105169 614 ntBASIC12.52□□□□□ -0.41
TraipQ8VIG6 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Gm11500-201ENSMUST00000118237 601 ntBASIC12.52□□□□□ -0.41
TraipQ8VIG6 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Gm10731-201ENSMUST00000181171 448 ntBASIC12.52□□□□□ -0.41
TraipQ8VIG6 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Gm7600-201ENSMUST00000209657 785 ntBASIC12.52□□□□□ -0.41
TraipQ8VIG6 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.52□□□□□ -0.41
TraipQ8VIG6 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TraipQ8VIG6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.51□□□□□ -0.41
TraipQ8VIG6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Nifk-201ENSMUST00000027626 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms